PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036801-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 313aa    MW: 34805.9 Da    PI: 4.6284
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036801-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-07181232255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+  +e+E rRR  i ++ + L +llP  +  ++k+ +  +i+  ++ +Ik+Lq
  AUR62036801-RA 181 RERSKEAETRRRLIISQRVQDLHDLLPATF--KDKRGNQESIVNDVIGHIKYLQ 232
                     666799**********************64..9999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MVCSEQVPFS GADYYNGNLL PFPADQTSAM LDSQFWYGDT ILAANGFSQV PMNAIHNATD  60
VTQSDALAGF NHIPLSTDPF IDRLEVQNYD ISAQRSSLPF YGTQESSRHG GLDNFVLNQW  120
MPKEEPISFM DMEWQQVESP AFPVQAANVN DTHEFLSNVK VEADTSDVAP VTLKSVSRTN  180
RERSKEAETR RRLIISQRVQ DLHDLLPATF KDKRGNQESI VNDVIGHIKY LQLQLKELSR  240
SRLGGDSSSG PLKFDEGYGH YQPHEQMFGE SLDKILGSLL EENPVAAHNL FESKGLCMVP  300
MASTDALSCN IK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.14e-08bHLH family protein