PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036626-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 280aa    MW: 31455.4 Da    PI: 6.9881
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036626-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.37.9e-29131581128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee........vikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknr 76 
                     lppG+rF P++e+l+++yL +k + ++         +        +ike+++y+++P dLp+       + +++++wy F++r + + +++r nr
  AUR62036626-RA  13 LPPGCRFYPSEEQLLSYYLGHKNHLNSpqqssS---SssnadyydAIKEINLYDYNPFDLPEltcfrfGCGGRKRHWYCFTERVNGE-EEERGNR 103
                     79*******************988887555550...1455556659***************65777664455778******999876.5688999 PP

             NAM  77 atksgyWkatgkdkevlsk.kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      +  gyWk +g+ ++v+ + ++   g++k ++fy  k + +++++tdW+m ey+l
  AUR62036626-RA 104 RAGIGYWKRKGRVRDVMGNgGNVILGTRKCFIFYleKSNGKTAVRTDWFMYEYTL 158
                     899***************9445558*********7666778889*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MEAPKAPLSP SILPPGCRFY PSEEQLLSYY LGHKNHLNSP QQSSSSSSNA DYYDAIKEIN  60
LYDYNPFDLP ELTCFRFGCG GRKRHWYCFT ERVNGEEEER GNRRAGIGYW KRKGRVRDVM  120
GNGGNVILGT RKCFIFYLEK SNGKTAVRTD WFMYEYTLID SFKASFVVCR VFVKSRVRNS  180
ISEHALSSCA EESIATVRHI GIQHDSSTVS VLDEDKAHGF YYVNGKIAGQ PTKLMEETEP  240
NIPVKSPGHV GSADLVNSSS PRHLVSIVDG DFIELDDLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.25e-20NAC family protein