PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036543-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 336aa    MW: 37650.2 Da    PI: 7.5788
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036543-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP94.61.9e-2987170385
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 
                     ++k r+ ki+T++g+RdRR+Rlsa++a++f+d+qd+LG+d++ ++++WL+ +ak +i++l ++s++++s+  ++   ++s  +s
  AUR62036543-RA  87 ARKGRSNKIYTARGPRDRRIRLSADIAIQFYDVQDRLGYDRATEAVDWLISKAKGSIDKLFDNSFQQQSKHlTHLGAQNSFYQS 170
                     6999***********************************************************888886665333333333322 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MHSYTATPAT LLIPFSIGST AIWFSSCRKC IFLLYSFPAT DKRAVPNALR PKPSNKGHSH  60
GAIVDVTLIS GKIIEMQDKR TMRTTSARKG RSNKIYTARG PRDRRIRLSA DIAIQFYDVQ  120
DRLGYDRATE AVDWLISKAK GSIDKLFDNS FQQQSKHLTH LGAQNSFYQS EYYLTESMSG  180
REDSGAKVDP LPESISSRDD YGAPNLHNSY DNISMYNCTM DSSMILPCIQ MENSSENFAH  240
PTISTPLGLQ HSSLPSFQQM EKNGQNSRMV MFNSKFTSKY GEHPFISNSE PLFFQAPNNE  300
SSSSFHTPIS DPELNLCLPG YCTSTFSDSE QWSIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.11e-28TCP family protein