PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036158-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 325aa MW: 35673 Da PI: 8.1889

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036158-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.1	2.8e-56	16	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv + +++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ AUR62036158-RA 16 LPPGFRFHPTDEELISYYLLKKVLDGNFSG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSS 109 79***********************999.89***********99999************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfy+grapkgek++Wvmheyrle AUR62036158-RA 110 kTSALVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 144 56778**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MDQPFFLHFD NSESNLPPGF RFHPTDEELI SYYLLKKVLD GNFSGRAIAE VDLNKCEPWE 60 LPEKAKMGEK EWYFFSLRDR KYPTGLRTNR ATEAGYWKAT GKDREIYSSK TSALVGMKKT 120 LVFYRGRAPK GEKSNWVMHE YRLEGKFSYH YLSRTSKDEW VISRVFQKIG NGIGTTSTGT 180 TNTGGGKKTR CSGIMSSLYN YNSSNNDACS SPSSASISIS QQLPPLLDSS PYGGALNEAC 240 SYDDGSESNN TTNNPIKKEH VSWLPVFPSL RSLQDNLHLP WVGGGTPVQG GCELDVMMGG 300 TNATWGGGNG GGGVSLHGVL ALLV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-103	NAC family protein