PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62036063-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 205aa MW: 21854.5 Da PI: 5.2283 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 28.6 | 4.1e-09 | 66 | 125 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee.......vikev.diykvePwdLpk 49 lp+G+rF+Ptd+e++ ++L+ kv+ ++ + +++ +i++++P++Lp+ AUR62036063-RA 66 LPAGVRFDPTDQEII-QHLEGKVRPNDessfhglH---PlidefipTLEGEnGICYTHPEKLPE 125 799************.99******99955555541...055554333444447*********93 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MTWCNEVDDV QTVEKNNSLP SSTSSRPSND NLDTKNVTAR SVKSCPSCGH QIKCQQQARI 60 NDLPGLPAGV RFDPTDQEII QHLEGKVRPN DESSFHGLHP LIDEFIPTLE GENGICYTHP 120 EKLPEVGLGG GVVWVRCGPG WWGGLGWRWA WVVGWSGLEV GLGGGVVWAR GGSGWWGGLG 180 WTWLGLVVVG FRGVGSGVGE GGVG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 2e-41 | NAC family protein |