PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035292-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 209aa    MW: 23189.2 Da    PI: 9.4503
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035292-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1258e-3943124281
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......ssssaseceaesssss 81 
                     +gkkdrhskihT+ g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL++++k+aik+l +       +   +s   +e+ +++
  AUR62035292-RA  43 TGKKDRHSKIHTAHGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFNKSKAAIKDLSDKsctsilP---SSPL-EEMIKVN 124
                     79************************************************************996653331...2222.2222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MQDETTNVDQ RIGGINNPGE KAAAKKGIKK RQDRVGGSSK RRTGKKDRHS KIHTAHGPRD  60
RRMRLSLQIA RKFFDLQDML GFDKASKTIE WLFNKSKAAI KDLSDKSCTS ILPSSPLEEM  120
IKVNLQQPLE DHMASVGIIE KFLATTASSS IDDSQDEALA RAFSMDLGQF GAISTTMEGT  180
MVVNSEYNQV QGHNCAFMDR TYNQGYID*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.16e-32TCP family protein