PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035285-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 345aa    MW: 37729.1 Da    PI: 6.5586
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035285-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.72.3e-14153199354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  AUR62035285-RA 153 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 199
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MQQYHQATSH SDPFGGNFVG GGGRAGMVFP DLSPPPPIPP QQHLLPWELP QVVHSFQPSM  60
TNNHNLDPYF FPSSSSYGGL FTTRRSSSSN HHTNSLQFAY EGASSDHHHL RLLSDALGPM  120
VHQPGSAPFG LQAELNKMTA QEIMDAKALA ASKSHSEAER RRRERINNHL AKLRSLLPST  180
TKTDKASLLA EVIQHVKELR RQTSIIAETS VVPTESDELT VDPASDEQDG KFIIKASLCC  240
DDRTDLLPDL IKALKTLRLR TLKAEITTLG GRVKNVLFVT HEPNISDHDN NDNQDDHDED  300
VPPGQCSISS IQEALKAVME KSGGGDESTS GNPKRQRTAN ITIS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159164ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.17e-87bHLH family protein