PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62034813-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 229aa MW: 26462.8 Da PI: 7.32 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 111 | 1.4e-34 | 14 | 146 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk...rknratksgyWkatgkdkev 92 lppGfrF+Ptdeel+ +yL+ k+ + +l++ ++i+ev+ +k++Pw+Lp + +e y F+k+ ++++ + r+ rat+ gyW++tg++ ++ AUR62034813-RA 14 LPPGFRFQPTDEELLFQYLRCKIFSLPLPA-SIIPEVHSLKLDPWELPG---DSMEERYVFTKKGGRHKKRNqinRSIRATNLGYWEETGSEMHI 104 79****************************.89***************3...356799****98766665441126667899************* PP NAM 93 lsk..kgel......vglkktLvfykgrapkgektdWvmheyrl 128 + + +g+kktLv++ grap+g+ tdW m+ey+l AUR62034813-RA 105 SPPpsQ--NfetmmmMGIKKTLVYHMGRAPSGSPTDWYMNEYSL 146 998550..3445556***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MKKHNFVGEN LNRLPPGFRF QPTDEELLFQ YLRCKIFSLP LPASIIPEVH SLKLDPWELP 60 GDSMEERYVF TKKGGRHKKR NQINRSIRAT NLGYWEETGS EMHISPPPSQ NFETMMMMGI 120 KKTLVYHMGR APSGSPTDWY MNEYSLVYNN KNNKGVSKME DWVIWHVFLK QRIEGNDDAI 180 MLDYNNSHYR LTSNISSPCS SSSSSSNSFA HVSSYELHSD EESSYNFM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 3e-44 | NAC family protein |