PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62034777-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 340aa MW: 37406 Da PI: 7.4317 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.7 | 2.4e-09 | 154 | 201 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L+ ++P + +k Ka +L + ++Y++sLq AUR62034777-RA 154 SHSLAERVRREKISERMKTLQAIVPGC----DKVTGKALMLDEIINYVQSLQ 201 8*************************9....555*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MAAFQQYPAS FLVDSVFMPA IKTPEIGAFD EFIAKSNQFY ASSEKSQDPF TIYSQEGSSI 60 DNKPSSVSEK QRTESLSMAD KGDSSDQMTQ SSVPVDKKRK SRKGSSSNSA NSKDVKQAKC 120 KKQKEDKEAM KDKSDEPPKG YIHVRARRGQ ATDSHSLAER VRREKISERM KTLQAIVPGC 180 DKVTGKALML DEIINYVQSL QSQVEFLSMK LASLDPMVYN FGLMDHDPMM FGTQAMTNGM 240 TLPMQPLMQP TSNGGSSIDQ PQAFATTNAV SCSTTSSAST PTFTSPVVDS STSLIQQQEQ 300 KPTLLPLQDA GSLYWGLNEQ QRQSIINQLG FTNNLYSFQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 124 | KKRKSRKGSSSNSANSKDVKQAKCKKQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 1e-50 | bHLH family protein |