PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034764-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 355aa MW: 38318.3 Da PI: 9.2049

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034764-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.6	7.9e-12	165	207	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L AUR62034764-RA 165 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 207 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNRGVVGGGI LTGFSEFSTQ NEMDSPNLGS NPHFTSFQLG ENDGFGVGSG SGSGSGSRFR 60 GFDEGLGNTM FMNRASKLLK PLDNSAPVGA QPTLFQKRAA LRKNSVSLDG SAFNYDSDDF 120 TENNNFKIGG DDGGKNGGTN SNNTSTLTGG DSKGKKKGLP AKNLMAERRR RKKLNDRLYM 180 LRSVVPKISK MDRASILGDA IEYLKELLQK INDLHNELEL TPSSLPLPTN FHPLTPTLPN 240 LPSRIKEELC PSSLPSPNGQ PARIEVRLRE GRAVNIHMFC GRRPGLLLST MKTLDGLGLD 300 IQQAVISCFN GFAMDIFRAE QCKDGQDLHP DQIKAMLLDL TTFHGSTVVG NGNV*

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNRGVVGGGI LTGFSEFSTQ NEMDSPNLGS NPHFTSFQLG ENDGFGVGSG SGSGSGSRFR  60
GFDEGLGNTM FMNRASKLLK PLDNSAPVGA QPTLFQKRAA LRKNSVSLDG SAFNYDSDDF  120
TENNNFKIGG DDGGKNGGTN SNNTSTLTGG DSKGKKKGLP AKNLMAERRR RKKLNDRLYM  180
LRSVVPKISK MDRASILGDA IEYLKELLQK INDLHNELEL TPSSLPLPTN FHPLTPTLPN  240
LPSRIKEELC PSSLPSPNGQ PARIEVRLRE GRAVNIHMFC GRRPGLLLST MKTLDGLGLD  300
IQQAVISCFN GFAMDIFRAE QCKDGQDLHP DQIKAMLLDL TTFHGSTVVG NGNV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	173	KKKGLPAKNLMAERRRRKK
2	167	174	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-108	bHLH family protein