PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62034734-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NF-YB | ||||||||
Protein Properties | Length: 211aa MW: 23027.3 Da PI: 7.9285 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 87.3 | 1.7e-27 | 1 | 89 | 8 | 96 |
NF-YB 8 lPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +P+ v+ ++ ++lP+ akis +aket+q+c++efi+f+ +ea+d + + r +ddl+ a+ +lGf++yvepl++ +++yre++g+ AUR62034734-RA 1 MPVVYVICVICRALPSTAKISIKAKETIQKCIAEFIGFILNEANDIRKVDYRMVTIADDLVEAMYKLGFDHYVEPLRTLIRRYREVKGK 89 79999************************************************999******************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MPVVYVICVI CRALPSTAKI SIKAKETIQK CIAEFIGFIL NEANDIRKVD YRMVTIADDL 60 VEAMYKLGFD HYVEPLRTLI RRYREVKGKD NTQAQQMRLY KPILLELAVI VSPLAVKSTT 120 TTPMKEMNYN GGSSSNNDNG VDQYVDHGYG NVINGTTMMN FNGGSSSNNN RSSSNSIGGG 180 RVEYVNHGCG VGVIGGGVID NTTVINYDIV * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 7e-26 | NF-YB family protein |