PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62034677-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 252aa MW: 27899.4 Da PI: 5.7478 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.6 | 1.2e-09 | 142 | 177 | 16 | 55 |
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 i+s+f+ Lrel+P + ++K +Ka+ L +++eYI++Lq AUR62034677-RA 142 IRSRFHMLRELIPYS----DQKRDKASFLLEVIEYIQYLQ 177 89************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
LKGAGGLLKT HTFLQPLEGE EKSGTKEDNL VDIDVKPPSA APPTSVVEYV LPGGIGTYSI 60 SHISYFNPRV PKPEENIFLV ASATSNDKND DNSNCSSYTG SGFTLWDEST VKKGNKEKEN 120 LGDENIVKGF LYITYLPVLR LIRSRFHMLR ELIPYSDQKR DKASFLLEVI EYIQYLQEKV 180 NRYEGAYPGW NSEPPKLNPL RNSHGATESF VDQSRAVNAS PVLMFGAKVD EKATPDVSLN 240 VPCNPQTPSR M* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 9e-29 | bHLH family protein |