PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034673-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 404aa MW: 43678.7 Da PI: 6.1913

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034673-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.3	2e-06	139	170	20	55
HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ +l+P++ ++K +Ka+ L +++eYI++Lq AUR62034673-RA 139 ISHVERLIPHS----DQKRDKASFLLEVIEYIQYLQ 170 56667899998....9*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MYVLPGGIGT YSISHISYFN PRVPKPEENI FLVAPAASND KNDDNSNCSS YTGSGFTLWD 60 ESTVKKGNKE KENLGDENIV KESTIKMGQW PLDRPSQSSS NHRSSVSPLS SSQAIIQKSQ 120 SFMEMIKSAK CPHSVEEEIS HVERLIPHSD QKRDKASFLL EVIEYIQYLQ EKVNRYEGAY 180 PGWNSEPPKL NPLSRAVNAS PVLMFGAKVD EKATPAVSLN VLCNPQTPAE CSIINDINVK 240 TVDQQPGKTN KAGSISPPLQ HDIHAPIINS CAVAPPPVRL PTEGGNASFP QLQLWQGRTS 300 ASEPSLATDK LKDQELAREG GTINISSVVE YANTSLPSSG VDLSQASISV EVDIGKRAHN 360 RQDSQEAAGK GVEIPSGNPS LQHARVDSTS SESDHAVKRL KTG*

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MYVLPGGIGT YSISHISYFN PRVPKPEENI FLVAPAASND KNDDNSNCSS YTGSGFTLWD  60
ESTVKKGNKE KENLGDENIV KESTIKMGQW PLDRPSQSSS NHRSSVSPLS SSQAIIQKSQ  120
SFMEMIKSAK CPHSVEEEIS HVERLIPHSD QKRDKASFLL EVIEYIQYLQ EKVNRYEGAY  180
PGWNSEPPKL NPLSRAVNAS PVLMFGAKVD EKATPAVSLN VLCNPQTPAE CSIINDINVK  240
TVDQQPGKTN KAGSISPPLQ HDIHAPIINS CAVAPPPVRL PTEGGNASFP QLQLWQGRTS  300
ASEPSLATDK LKDQELAREG GTINISSVVE YANTSLPSSG VDLSQASISV EVDIGKRAHN  360
RQDSQEAAGK GVEIPSGNPS LQHARVDSTS SESDHAVKRL KTG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	2e-32	bHLH family protein