PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034672-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 312aa    MW: 34052.4 Da    PI: 6.172
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034672-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.6e-101421771655
                     HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     i+s+f+ Lrel+P++    ++K +Ka+ L +++eYI++Lq
  AUR62034672-RA 142 IRSRFHMLRELIPHS----DQKRDKASFLLEVIEYIQYLQ 177
                     89************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
LKGAGGLLKT HTFLQPLEGE EKSGTKEDNL VDIDVKPPSA APPTSVVEYV LPGGIGTYSI  60
SHISYFNPRV PKPEENIFLV ASATSNDKND DNSNCSSYTG SGFTLWDEST VKKGNKEKEN  120
LGDENIVKGF LYITYLPVLR LIRSRFHMLR ELIPHSDQKR DKASFLLEVI EYIQYLQEKV  180
NRYEGAYPGW NSEPPKLNPL RNSHGATESF VDQSRAVNAS PVLMFGAKVD EKATPAVSLN  240
VLCNPQTPTE CSIINAINVK TVDQQPGKTN KAGSISPPLQ HDIHAPIINS CAVEPPPVRL  300
PTEGGNASFP Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-33bHLH family protein