PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034435-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 342aa MW: 39116.2 Da PI: 4.9593

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034435-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.3	9.7e-56	18	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ +i e+d++k+ePwdLp+++k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ AUR62034435-RA 18 LPPGFRFHPTDEELITHYLSEKVLDSNFST-IAIGEADLNKIEPWDLPSQAKMGEKEWYFFVVRDRKYPTGLRTNRATEAGYWKATGKDKEIFK- 110 79***********************999.88***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 + lvg+kktLvfy+grapkgekt+Wvmheyrle AUR62034435-RA 111 AKVLVGMKKTLVFYTGRAPKGEKTNWVMHEYRLE 144 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MEMDNYSTIT IEDENMELPP GFRFHPTDEE LITHYLSEKV LDSNFSTIAI GEADLNKIEP 60 WDLPSQAKMG EKEWYFFVVR DRKYPTGLRT NRATEAGYWK ATGKDKEIFK AKVLVGMKKT 120 LVFYTGRAPK GEKTNWVMHE YRLEGKLSKY NLPKNAKNDW VISRVFKKSL GAKKPDYLEV 180 VSLEELQPNF LPPLMDSSPY NNGETTKAVD ANPSHVTCFS YPSMVENQQF IKTTKQEETT 240 TNNNNMFGIG NNIPCSPLFR TYSRTSLSNM LLEPEMPDFQ FVDSLFTQDQ PMMKLLLEGK 300 ESNPTKEELS GIDMSSSGIS NHDIVNNNQI GPFDHDCLWD Y*

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MEMDNYSTIT IEDENMELPP GFRFHPTDEE LITHYLSEKV LDSNFSTIAI GEADLNKIEP  60
WDLPSQAKMG EKEWYFFVVR DRKYPTGLRT NRATEAGYWK ATGKDKEIFK AKVLVGMKKT  120
LVFYTGRAPK GEKTNWVMHE YRLEGKLSKY NLPKNAKNDW VISRVFKKSL GAKKPDYLEV  180
VSLEELQPNF LPPLMDSSPY NNGETTKAVD ANPSHVTCFS YPSMVENQQF IKTTKQEETT  240
TNNNNMFGIG NNIPCSPLFR TYSRTSLSNM LLEPEMPDFQ FVDSLFTQDQ PMMKLLLEGK  300
ESNPTKEELS GIDMSSSGIS NHDIVNNNQI GPFDHDCLWD Y*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-107	NAC family protein