PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62034420-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 227aa MW: 24316.6 Da PI: 10.2866 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 111 | 6.3e-35 | 41 | 97 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 v YkeClkNhAaslGgha+DGCgEfmp+++++ +++++lkCaACgCHRnFHRre+ee AUR62034420-RA 41 VLYKECLKNHAASLGGHALDGCGEFMPAPTATaSDPTSLKCAACGCHRNFHRREPEE 97 78***************************99999********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
LSIVPPSKSP EAESETPPRI QSSKPLSFSN GVLKRHAPAI VLYKECLKNH AASLGGHALD 60 GCGEFMPAPT ATASDPTSLK CAACGCHRNF HRREPEETVN ATTPLTHVIE YHPHHRHHPL 120 PPPASNPQTA PAVATRGVRS PGSQSPPPIS SSYYPGSAPH MLLALSSGGV GATTASDELI 180 LITTAKPKAV PNQIQPRSKR PNARIRRKSR VENAENKRRF SEWVLQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39760.1 | 2e-39 | ZF-HD family protein |