PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034400-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 386aa MW: 43291.9 Da PI: 8.133

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034400-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.1	3e-52	15	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv +yLk+k+ +++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ AUR62034400-RA 15 LPGFRFHPTDEELVGFYLKRKILQQSLPI-ELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSSRPNRVTCAGFWKATGTDRPIYSSd 108 69*************************.89***********9888999***********************************95 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +glkk+Lvfy+gra kg ktdW+mhe+rl AUR62034400-RA 109 GAKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRL 141 5566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEEKHEVDKV DDVILPGFRF HPTDEELVGF YLKRKILQQS LPIELIKQVD IYKYDPWDLP 60 KLASTGEKEW YFYCPRDRKY RNSSRPNRVT CAGFWKATGT DRPIYSSDGA KCIGLKKSLV 120 FYRGRAAKGM KTDWMMHEFR LPSLHDSAPP KKLFDRSFPA NDAWAICRIF KKINTMAQRA 180 ITHSWVSPLT ETTAACDMFN QASNLIGSHF SPDNISCTTE GANSSIQPCN NNNLQNTTSS 240 PVSFSTLDQY KPITNPTVSK VSVIPTSFAD LQNNLIFPSG EVSAMFLNLT PAFTSEVGKI 300 SDIIDFGGSQ QLFNGLPMNL SQNIIEADDQ LGYRKNQNQQ WNSIRSIGFP FSLPSSVSNS 360 GTLSWDSAPC PSELSTSYSS NKCYR*

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEEKHEVDKV DDVILPGFRF HPTDEELVGF YLKRKILQQS LPIELIKQVD IYKYDPWDLP  60
KLASTGEKEW YFYCPRDRKY RNSSRPNRVT CAGFWKATGT DRPIYSSDGA KCIGLKKSLV  120
FYRGRAAKGM KTDWMMHEFR LPSLHDSAPP KKLFDRSFPA NDAWAICRIF KKINTMAQRA  180
ITHSWVSPLT ETTAACDMFN QASNLIGSHF SPDNISCTTE GANSSIQPCN NNNLQNTTSS  240
PVSFSTLDQY KPITNPTVSK VSVIPTSFAD LQNNLIFPSG EVSAMFLNLT PAFTSEVGKI  300
SDIIDFGGSQ QLFNGLPMNL SQNIIEADDQ LGYRKNQNQQ WNSIRSIGFP FSLPSSVSNS  360
GTLSWDSAPC PSELSTSYSS NKCYR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-105	NAC family protein