PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034089-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 349aa    MW: 38875.8 Da    PI: 4.5211
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034089-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-102743141055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  AUR62034089-RA 274 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 314
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MMMEGAEWSS FNGISVNDEA NFMAQLFPNC SLEQELESCS LALSSSCYSG MTEDDRLDSS  60
SFFSTDDKNF NSYCLSQGSN YSGGSSSTVG YPYHENFCLS ETHQIFAAND NSCHFPVDLC  120
PSASKNFIQR FPGNPMERSD SLNLEISCGG SFEDQPEFSE NKNLQLKQEY EMSEVEPASE  180
DRSSGLFESG KKRSRISEKG KRSVRTKRNQ KNGSDDEDNA PDFTKQNSST SSEELEECNG  240
SQELGSKETA TVKMNGKTRA SRGAATDPQS LYARKRRERI NERLRILQNL VPNGTKVDIS  300
TMLEEAVHYV KFLQLQIKLL SSDEMWMYAP LAYNGVDFGL DSKISAQL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.14e-46bHLH family protein