PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034044-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YB

Protein Properties

Length: 282aa MW: 32519.6 Da PI: 4.3805

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034044-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	110.5	1e-34	7	71	33	97
NF-YB 33 etvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 t+qecv efisf+t+e+sdkcq+ekrktingddllwa+ tlG+e+yveplkvyl+kyrelege+ AUR62034044-RA 7 ATIQECVLEFISFITGETSDKCQKEKRKTINGDDLLWAMKTLGLEEYVEPLKVYLHKYRELEGET 71 69************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MKKALVATIQ ECVLEFISFI TGETSDKCQK EKRKTINGDD LLWAMKTLGL EEYVEPLKVY 60 LHKYRELEGE TMTVFGERLD EKDLLVHGVM EYEGGFTNIF NDVAEDLNAS HLKMYLGYDE 120 TTFDPFISLL VQYGMIHIYC EREVTAILEP NCVADYIFDE ELYVGSKMSF TVLLQHDDED 180 TFKSHEKAKN IDKDYEEELK QIKRVVENKR KQPKEIDSEY EDSTDLDSLD DASDEEDCRL 240 RDELPSSTQP LTQLQQKGKK QKPLQTAAGF SISEPRRQAA Y*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	1e-37	NF-YB family protein