PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033952-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 531aa    MW: 59469.5 Da    PI: 4.8265
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033952-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1546.9e-48131442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                     ppGfrFhPtdeel+ +yLk+kv++++l+l ++i+e+d+ykv   d +         +k+++++w+fFs+rd+ky++g+r+nratk+gyWkatgkd
  AUR62033952-RA  13 PPGFRFHPTDEELILYYLKRKVSRRSLKL-DIIAEIDVYKVSHLDRNLcdlvglsLLKNGDRQWFFFSPRDRKYPNGSRSNRATKQGYWKATGKD 106
                     8****************************.99********9754433244677777788999********************************* PP

             NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++++ + ++vg+kktLvfy grap+g++tdWvmhey l
  AUR62033952-RA 107 RPITC-NARNVGIKKTLVFYLGRAPTGKRTDWVMHEYVL 144
                     *****.9999***************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    
MAASSSVANE VWPPGFRFHP TDEELILYYL KRKVSRRSLK LDIIAEIDVY KVSHLDRNLC  60
DLVGLSLLKN GDRQWFFFSP RDRKYPNGSR SNRATKQGYW KATGKDRPIT CNARNVGIKK  120
TLVFYLGRAP TGKRTDWVMH EYVLEEDELK RCKNVYDYYV IYKVFKKSGA GPKNGEQYGA  180
PFKEEDWPED DFPKSTSNCN ELYTAEQMVS IPPIDICQNA QVDNSVNDID EFLNGVLNEP  240
APLPLNDDDD FDQALSQFIG EEEHSLVTNQ SFEEVSTFFR GDDFIEMDDL FSPGPAQGLS  300
TSLSLPTNAE ILRNSNFRME DGEFTLQNSQ PTNGEIQGNS HFRMEDGLGE FDLYYDADAI  360
LHQVAASDPT MPFQYHGSHS QVSELASETW TYEPKLCVVN STVPSTGVVY DGMSDSNQKQ  420
NQEAESSQSW SSLWSFVDSI PAAPASAADS ALLNKAFQRM SSFSRLKMSS KIIIPAVSGN  480
INSKSLSTNA GSRLKGYFFF SFLAALFALV CVFIGSNASA FGKLHCRMKL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.12e-92NAC family protein