PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033276-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 320aa    MW: 35952.1 Da    PI: 7.3227
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033276-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.31.5e-36541961128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 
                     lp+G++F+Ptd+el+ e+L++kvegk+      ++++  +i+   +i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+++        
  AUR62033276-RA  54 LPAGVKFDPTDQELI-EHLEAKVEGKSskshplIDEFIpTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 146
                     799************.99********96665443333333666646**********.555666799******************73334555544 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  AUR62033276-RA 147 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 196
                     778************.999***********5547999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MNNNNSSNKS QLSSISSASD LIDAKLEEHQ LCGSKQCPGC GHRLEGSKPD WVGLPAGVKF  60
DPTDQELIEH LEAKVEGKSS KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF  120
HRPSKAYTTG TRKRRKIQTE CDLQGGETRW HKTGKTRPVM VNGKQKGCKK ILVLYTNFGK  180
NRKPEKTNWV MHQYHLGQHE EEKEGELVVS KIFYQTQPRQ CNWTMEQVIT HHGRDDQISI  240
SAGVNVVGGA AAGLSSFTAL DMQQLRTTAE QFSFNTFANN SRKGFDEESS MTNPPAETDW  300
MKYSFWHDAD HSDPHHHHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-135NAC family protein