PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033197-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HB-other

Protein Properties

Length: 914aa MW: 101176 Da PI: 7.5131

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033197-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	20.2	1e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ l+ ++++F ++ +s++e +e+ + gLt +qV+ +F +R + +k AUR62033197-RA 69 KRPRDLLNPKALQYMQAVFSMKDAISKKESREIGALFGLTVTQVREYFASQRSRVRK 125 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MEVLKDYPSE IDIGSSMESV QKGMELQKQL FHTQIDQLRN IVVTQCKLTG VNPLSQEMAA 60 GALSINIGKR PRDLLNPKAL QYMQAVFSMK DAISKKESRE IGALFGLTVT QVREYFASQR 120 SRVRKLVRLS RERAIRENGN KELQDSISAD SDLMLPIETT PLSSVGPDVE EAPSCSNQDE 180 GLPGLGESEK DFVENIFSSM CKEETFSGQV KLMEWILQIE NPTVLCWFLM KGGVMILATW 240 LSQAATEEQT SVISAVLKVL CHLPLNKALP AHMSAILQGV NKLRFYRVPD ISNRARVLLS 300 KWSKMFGELV GDYSWQSSVD ASDDMLVTSY LGPDDTRKVE TIETMKLLTA SSDESNKKLM 360 LGTSAAHNKE RRKVQLVEQP GQKAASNSQP IKAVAANQRR PITADEIQKA KMRAQFMQSS 420 KRKTEGPKKP SLLTNDLLSA SEAYLRPKLE AQKKARLLPP KSSIKQVEFV PEQKPAFDQK 480 ESLLEKCRRV QIPWLAPPEV HHVAEIGSGE SSKEMEVQRN RIHREKETTY RTLQDVPPNP 540 KEPWDIEMDY DDTLTPEIPI EQLPDADTAV TSVESQNPTV APVDPSTSSQ AEPDLELLAV 600 LLKNPELVFA LTSGQASGLS SEDTVKLLDL LKSNGGAALL NGQAVEKPEE VKVEVSLPSP 660 TPTPTRNVEV SLPSPTPPSR FEVSLPSPSP STNPGPSGWT TTEAAKNPFS RRAMGVQDTM 720 AVFPVVTAAV VTSDRPQNNC GLQPQFLSTA SAVITSLPQH HPSQTLIPEY QPTYFPPVLN 780 QNPPMPSYSR PSPALSHNTG VVKARHGRHG LSHTPFSNHV SQNVYNPTMA GSQLGPVRER 840 NDYHMGGHKG YESWSPENSP GPARYPPEHH HGHGWSYPEQ RERYGPPDRL SRNQNWRGGG 900 SVNRRWNSGD RRR*

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MEVLKDYPSE IDIGSSMESV QKGMELQKQL FHTQIDQLRN IVVTQCKLTG VNPLSQEMAA  60
GALSINIGKR PRDLLNPKAL QYMQAVFSMK DAISKKESRE IGALFGLTVT QVREYFASQR  120
SRVRKLVRLS RERAIRENGN KELQDSISAD SDLMLPIETT PLSSVGPDVE EAPSCSNQDE  180
GLPGLGESEK DFVENIFSSM CKEETFSGQV KLMEWILQIE NPTVLCWFLM KGGVMILATW  240
LSQAATEEQT SVISAVLKVL CHLPLNKALP AHMSAILQGV NKLRFYRVPD ISNRARVLLS  300
KWSKMFGELV GDYSWQSSVD ASDDMLVTSY LGPDDTRKVE TIETMKLLTA SSDESNKKLM  360
LGTSAAHNKE RRKVQLVEQP GQKAASNSQP IKAVAANQRR PITADEIQKA KMRAQFMQSS  420
KRKTEGPKKP SLLTNDLLSA SEAYLRPKLE AQKKARLLPP KSSIKQVEFV PEQKPAFDQK  480
ESLLEKCRRV QIPWLAPPEV HHVAEIGSGE SSKEMEVQRN RIHREKETTY RTLQDVPPNP  540
KEPWDIEMDY DDTLTPEIPI EQLPDADTAV TSVESQNPTV APVDPSTSSQ AEPDLELLAV  600
LLKNPELVFA LTSGQASGLS SEDTVKLLDL LKSNGGAALL NGQAVEKPEE VKVEVSLPSP  660
TPTPTRNVEV SLPSPTPPSR FEVSLPSPSP STNPGPSGWT TTEAAKNPFS RRAMGVQDTM  720
AVFPVVTAAV VTSDRPQNNC GLQPQFLSTA SAVITSLPQH HPSQTLIPEY QPTYFPPVLN  780
QNPPMPSYSR PSPALSHNTG VVKARHGRHG LSHTPFSNHV SQNVYNPTMA GSQLGPVRER  840
NDYHMGGHKG YESWSPENSP GPARYPPEHH HGHGWSYPEQ RERYGPPDRL SRNQNWRGGG  900
SVNRRWNSGD RRR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-141	HB-other family protein