PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62033188-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 174aa MW: 19857.8 Da PI: 6.343 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 176.4 | 2.8e-55 | 65 | 160 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdr+lPianv+rimk++lPanakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal++lGf++y++plk yl++yre+ege AUR62033188-RA 65 KEQDRLLPIANVGRIMKHILPANAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALSSLGFDEYADPLKRYLHRYREFEGE 159 89*******************************************************************************************99 PP NF-YB 97 k 97 + AUR62033188-RA 160 R 160 7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 174 aa Download sequence |
MVDNITSSYS NRSLLPNYNP TPTSSSSQQH HGNYNQNIYH EGSNIRNSNE HDDHEHEDQA 60 LGTIKEQDRL LPIANVGRIM KHILPANAKI SKEAKETMQE CVSEFISFVT GEASDKCHKE 120 KRKTVNGDDI CWALSSLGFD EYADPLKRYL HRYREFEGER VANQNKEREN IHG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47810.1 | 2e-62 | NF-YB family protein |