PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62032954-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | TCP | ||||||||
Protein Properties | Length: 220aa MW: 22633.2 Da PI: 7.349 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 84.6 | 2.5e-26 | 1 | 83 | 24 | 104 |
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssgkaaksaakskksqksa 104 +++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ +++s s ++ ++g +a+ ++k+++s++++ AUR62032954-RA 1 MPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStsSPHSLASHHHLRTAGLSASGDNKTSPSPSPT 83 9*****************************************99999888444444444444333333333333444333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MPIICAARVF QLTRELGHKS DGQTIEWLLR QAEPSIIAAT GTGTTPASFS TSSPHSLASH 60 HHLRTAGLSA SGDNKTSPSP SPTPFLLGKR LRTTAEENEA QNGVVDKEDV VTTASLGPTA 120 GYWAIPARPD FWSFAAGPEM VVGPGGALGQ QAAAAAAMAG RFLTHTQQQQ HVTLGEASRV 180 GNYLPIAQGH HLNLLASLSG APASGAGGSS GGRRDDDPR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 5e-32 | TCP family protein |