PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62032868-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 211aa MW: 23852.5 Da PI: 8.9504 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.6 | 1.9e-12 | 68 | 113 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + rrRRd++N++f L +++P K++K ++Le+A++Y+k+L+ AUR62032868-RA 68 HAITKRRRRDKLNQRFIALAKVIPCF-----DKMDKTSVLEEAIKYVKQLE 113 88899********************5.....5*****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MESFQYSPTP SSESLSCCTT DDQDFGGIGV DGTLDRGGFE APKVNKGRGC NNRTGSMALN 60 FSLLSQYHAI TKRRRRDKLN QRFIALAKVI PCFDKMDKTS VLEEAIKYVK QLEERVKDLE 120 EQAKPRMVES AMLVKRTRET VDLESKKIAF PEIEAKVSNK DVLVRIYCKK QYGLLLLERI 180 LKEMDKVHLS INGTGLLSFG NHDLDITITA K |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 78 | RRRRDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 1e-36 | bHLH family protein |