PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032867-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 285aa    MW: 32227 Da    PI: 5.2479
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032867-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.64.5e-13125171455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h  +ErrRR+++ ++f  L  l+P +     kK +Ka+iL ++veY+k+L+
  AUR62032867-RA 125 EHVVAERRRREKMTQGFIALSALIPGL-----KKTDKASILGETVEYLKQLE 171
                     5889***********************.....9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MCILKSDNFD FFLQKFICSK FMEMSSGEWL SDLENEDPTS IMHHCQKMMS SDVFEFEDIF  60
QAPDLILSNN IEPAVMEATN KITPSIDCSW SSSGKLICFG SSEFETKPKL SNGNNNKRVM  120
LTSNEHVVAE RRRREKMTQG FIALSALIPG LKKTDKASIL GETVEYLKQL EDRAKVLEEQ  180
TSKRTMESVC LVNNIQTQTF DDAANSVSYS NKIMNPDDNL EIEAKVLNNN IFIRVHSLKN  240
QGLIQYLLEE IGKLNLTTLN CQTMQFGSYA ITITILAKEC LKKK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130135ERRRRE
2131136RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-33bHLH family protein