PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032816-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 273aa MW: 30891.8 Da PI: 8.6348

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032816-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.1	2e-54	10	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+ +yLk+++ ++++++ ++i+evdiyk++Pw+Lp k++ +e+ewyfF++rd+ky++g r+nrat sgyWkatg+dk+++s AUR62032816-RA 10 LPPGFRFHPTDEELIIHYLKNQAMSRPCPV-SIIPEVDIYKFDPWQLPDKAEFGENEWYFFTPRDRKYPNGIRPNRATLSGYWKATGTDKAIYS- 102 79**************************.89***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + vg+kk Lvfykgr pkg+ktdW+mheyrl AUR62032816-RA 103 GAKYVGIKKALVFYKGRPPKGSKTDWIMHEYRL 135 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MDAKRCSSSL PPGFRFHPTD EELIIHYLKN QAMSRPCPVS IIPEVDIYKF DPWQLPDKAE 60 FGENEWYFFT PRDRKYPNGI RPNRATLSGY WKATGTDKAI YSGAKYVGIK KALVFYKGRP 120 PKGSKTDWIM HEYRLTESKH QPIKQHGSMR LDDWVLCRIY KKRHVARAED SSSSPQGQIS 180 MVEGGASDAS SNQNEPEIKF PRTQSLSYLL DLDYLGPIAH LLNDNTSYNS SFDIQTSMGS 240 NAGLDQHVGP YQNIGLSCHQ INGNPCYPSS YK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-103	NAC family protein