PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032488-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 517aa MW: 56226.9 Da PI: 6.3956

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032488-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	95.6	7.5e-30	69	146	51	128
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + ++++ +glkktLvfy+g+apkg +t+W+m+eyrl AUR62032488-RA 69 AAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRGENSRPIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 146 345789**********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MSATSEVGGG WIEVGGEPAK VERGQGRACE GGARSGESRR RWSEGRGEPA IIRRGVTAVR 60 RGWWDVALAA IGEKEWFFYV PRDRKYRNGD RPNRVTTSGY WKATGADRMI RGENSRPIGL 120 KKTLVFYSGK APKGIRTSWI MNEYRLPQHE TERYQKAEIS LCRVYKRPGV EDHPSVPRGS 180 SLPSRLSSSS KATSSSSERK NYHNAFRAQT TCLQQQIEHP PPQMGDKVSE TDASSSTEVG 240 TALGLSHHSS YSALLNDHNP NLKHHHHHQV VVGGGEGGHG VITSLPSSLN TSITHHNHPT 300 PGLVHPKHHH QPTLNNDNNP SSSNSTTNNL PFLFSNYLFS PAAQQAQAAL VNNNPPTAAV 360 GGGSSSSSLQ LPPVTVAGAG GGLAFSERSL WDWNPYSEPN RDHFKEEEET KSFGDEFVPI 420 LNNINNVDDV EEAIENAEEA IDNVEEAIEI AEEAIENAEE LIDNAEYQVV PGKSIDSNSE 480 QTTKSNATEG AIWVFFGTGL ALAGSLGFPF PFVGIL*

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MSATSEVGGG WIEVGGEPAK VERGQGRACE GGARSGESRR RWSEGRGEPA IIRRGVTAVR  60
RGWWDVALAA IGEKEWFFYV PRDRKYRNGD RPNRVTTSGY WKATGADRMI RGENSRPIGL  120
KKTLVFYSGK APKGIRTSWI MNEYRLPQHE TERYQKAEIS LCRVYKRPGV EDHPSVPRGS  180
SLPSRLSSSS KATSSSSERK NYHNAFRAQT TCLQQQIEHP PPQMGDKVSE TDASSSTEVG  240
TALGLSHHSS YSALLNDHNP NLKHHHHHQV VVGGGEGGHG VITSLPSSLN TSITHHNHPT  300
PGLVHPKHHH QPTLNNDNNP SSSNSTTNNL PFLFSNYLFS PAAQQAQAAL VNNNPPTAAV  360
GGGSSSSSLQ LPPVTVAGAG GGLAFSERSL WDWNPYSEPN RDHFKEEEET KSFGDEFVPI  420
LNNINNVDDV EEAIENAEEA IDNVEEAIEI AEEAIENAEE LIDNAEYQVV PGKSIDSNSE  480
QTTKSNATEG AIWVFFGTGL ALAGSLGFPF PFVGIL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	5e-69	NAC family protein