PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032241-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 350aa    MW: 38522.8 Da    PI: 9.907
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032241-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.32.3e-112392702353
                     EEEEE-ST.T---EEEEEE-SSSTTEEEEEEE CS
            WRKY  23 sYYrCtsa.gCpvkkkversaedpkvveitYe 53 
                     +YY+C+s  gCp++k+ver+ e+p+++++tYe
  AUR62032241-RA 239 GYYKCSSMrGCPARKHVERCLEEPSMLIVTYE 270
                     7****9988**********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MEGVEEANKA AIESCHRVLN ILSQSQDQSQ FWNLGSETQQ AVTKFKRVVS LLSNGLGHGR  60
ARIVKHNRST TTPFTQTLFQ ESSNVPKIEP SSSNQQPVKT TFQLLKSNLN ESSIQENGST  120
TGKSCLSLGG NLSLELNSGA KTTPIQAEML YRRSNSGINL NFDNSSCTPT MSSTRSFISS  180
LSVDGSVANL DGSAFNLIGV SQSSDQLLSQ HRKRKHRVKR SIKVPAISNK LADIPPDEGY  240
YKCSSMRGCP ARKHVERCLE EPSMLIVTYE VGEGVHMVQN FGMSNISSFS LVVFVALIML  300
SFSSYGLKEE LKAEFSGLNE MQLKQKGRYI PWTKTYPVSR MPRIQKPGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.13e-64WRKY family protein