PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032189-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 275aa    MW: 30841.2 Da    PI: 6.5075
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032189-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP100.52.9e-31143218366
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............s 66 
                       kdrhski T+ g+RdRR+Rls+++a+ fF+Lqd LGfdk+s t+eWLl q+k ai el ++            +
  AUR62032189-RA 143 SNKDRHSKIRTAHGLRDRRMRLSLQVARPFFKLQDTLGFDKASRTVEWLLIQSKLAIEELIQSkhgspsgvttkcT 218
                     579************************************************************5444333322221 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MLNSSTLSNS TTTCTTNPIL YVDNILSYLI DDSNPNSKQD DHYSSNHYST SYYHLPSPLI  60
YNEIDDFVSN HDLEFIQQPF LANNSSILTD DSSILEVDHN KVDDSNKGGE VDGIVDDNEM  120
NHTIRSNKNI ISHGGLMKRK RSSNKDRHSK IRTAHGLRDR RMRLSLQVAR PFFKLQDTLG  180
FDKASRTVEW LLIQSKLAIE ELIQSKHGSP SGVTTKCTTI SSTYDDCEVD STIVEEERIG  240
CSKEKRGSKL HDFDTRKHGG RPTAVTNTMV VCPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.22e-24TCP family protein