PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032143-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 517aa MW: 55856.4 Da PI: 6.5823

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032143-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.6	4.4e-08	232	265	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +f+ Lrel+P++ ++K +Ka+ L +++eYI+ Lq AUR62032143-RA 232 PRFHMLRELIPHS----DQKRDKASFLLEVIEYIQFLQ 265 58999*****9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MFKCMTLSVF STLKGAGGLL KTHNFLQPLE GEEKPGPKED NLVDINAKPP SAAPPTSVVE 60 HVLPGGIGTY SISHISYFNP KVPKPEENIF SVAPATSNDK NDDNSNCSSY TGSGFTLWDE 120 STVKKGNTGK ENLGDENIVK ESTIKMGQWP LDRPSQSSSN HRSSVSPLSS SQALIQKSQS 180 FMEMIKSAKG PHSVEEEVEE DLSLKKESSS SLKGELRVNV GGKSSDQKAI TPRFHMLREL 240 IPHSDQKRDK ASFLLEVIEY IQFLQEKVNR YEGSYPGWNS EPPKLNPWRN SHVATESFVD 300 QSRAVNASPV LMFGAKVDEK ATPAVSLNFP RNPQTPAESS MINAINVKTV DQQPGTTNKA 360 GSVSPPLQHD IHAPIINSCA VAPPPVRLPF EGGNASFPQL QLWQSRASAF EPSLATDKLK 420 DQELALEGGT INISSIYSQG LLSTLTRALQ SSGVDLSQAS ISVQVDIGNR AHNRQDSQEA 480 AGKGVEIPSG NPSLQHARVD NTSSESDHAV KRLKTG*

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MFKCMTLSVF STLKGAGGLL KTHNFLQPLE GEEKPGPKED NLVDINAKPP SAAPPTSVVE  60
HVLPGGIGTY SISHISYFNP KVPKPEENIF SVAPATSNDK NDDNSNCSSY TGSGFTLWDE  120
STVKKGNTGK ENLGDENIVK ESTIKMGQWP LDRPSQSSSN HRSSVSPLSS SQALIQKSQS  180
FMEMIKSAKG PHSVEEEVEE DLSLKKESSS SLKGELRVNV GGKSSDQKAI TPRFHMLREL  240
IPHSDQKRDK ASFLLEVIEY IQFLQEKVNR YEGSYPGWNS EPPKLNPWRN SHVATESFVD  300
QSRAVNASPV LMFGAKVDEK ATPAVSLNFP RNPQTPAESS MINAINVKTV DQQPGTTNKA  360
GSVSPPLQHD IHAPIINSCA VAPPPVRLPF EGGNASFPQL QLWQSRASAF EPSLATDKLK  420
DQELALEGGT INISSIYSQG LLSTLTRALQ SSGVDLSQAS ISVQVDIGNR AHNRQDSQEA  480
AGKGVEIPSG NPSLQHARVD NTSSESDHAV KRLKTG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.6	4e-60	bHLH family protein