PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62031478-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 358aa MW: 38203.2 Da PI: 5.7346

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62031478-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.2	3.1e-22	241	303	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkre+rkq+NRe+ArrsR+RK+ae+eeL +kv++L eN aL++e+++l + ++kl+se+ AUR62031478-RA 241 ERELKREKRKQSNRESARRSRLRKQAEMEELGKKVDNLNVENLALRSEINKLVEDSEKLRSEN 303 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGNSEGEKPT RSEKAASPPR EQSSVHVYPD WAAVQAYYGS GALPPPYFNP AATSGHAVPP 60 YMWAPPQMMA PYGSPYAMYP HGGMYGPSAA PIIPAPLSLE TPTKSSGKDS GSGKVTKESD 120 VHAASGNGNA NAESAGDAAA GVRGQSLSTD CGTEGSCERS YDSSAREDNS SRSCNGVLDT 180 VTVFLLLTNL TGGLATRAKG MCNMQMNNVV PGIPMASVNP VGSSPANGVN SAAPCAPRQD 240 ERELKREKRK QSNRESARRS RLRKQAEMEE LGKKVDNLNV ENLALRSEIN KLVEDSEKLR 300 SENSSLMDKL KIMQGQSDEM DSERTENQET SHINTENLLS RVNNPVSNGV HEQSEEK*

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGNSEGEKPT RSEKAASPPR EQSSVHVYPD WAAVQAYYGS GALPPPYFNP AATSGHAVPP  60
YMWAPPQMMA PYGSPYAMYP HGGMYGPSAA PIIPAPLSLE TPTKSSGKDS GSGKVTKESD  120
VHAASGNGNA NAESAGDAAA GVRGQSLSTD CGTEGSCERS YDSSAREDNS SRSCNGVLDT  180
VTVFLLLTNL TGGLATRAKG MCNMQMNNVV PGIPMASVNP VGSSPANGVN SAAPCAPRQD  240
ERELKREKRK QSNRESARRS RLRKQAEMEE LGKKVDNLNV ENLALRSEIN KLVEDSEKLR  300
SENSSLMDKL KIMQGQSDEM DSERTENQET SHINTENLLS RVNNPVSNGV HEQSEEK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	264	RRSRLRK
2	258	265	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.2	4e-30	bZIP family protein