PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031178-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 258aa    MW: 28716.9 Da    PI: 6.9875
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031178-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.2e-1168114354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r+h e+ErrRR+riN  f++Lr  lP+a      K +Ka+ L +++  +++L
  AUR62031178-RA  68 RNHCEAERRRRERINGHFATLRNFLPSA-----VKIDKATLLAEVIAQVRML 114
                     57*************************9.....7********9999777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MESSFLVQSQ ELPDFGLFIT KNLELHCKSL GWVGESPLSD SKMDEVVKKP DSFGKKVISE  60
RKNSIALRNH CEAERRRRER INGHFATLRN FLPSAVKIDK ATLLAEVIAQ VRMLKKQAYE  120
ASKGLLVPTD ADEVVVEPYN DEDIAHGSFA FKVSVCCCYK PELIPDMRQA INDLELTIAK  180
AEISTLEGRV KNVLIVTGYK EDTGDDKTDK FAKCIHEALC SVLQKLSASE EYSPTSTLPN  240
KRRKVSCFES SISSPSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17479ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-32bHLH family protein