PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62031138-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | TCP | ||||||||
Protein Properties | Length: 248aa MW: 27961.8 Da PI: 5.0726 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 95.5 | 1.1e-29 | 5 | 89 | 3 | 86 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 ++k r+ ki+T++g+RdRR+Rlsa++a++f+d+qd+LG+d++ ++++WL+ +ak +i++l ++s++++s+ ++ + ++s +s AUR62031138-RA 5 ARKGRSNKIYTARGPRDRRIRLSADIAIQFYDVQDRLGYDRATEAVDWLISKAKGSIDKLFDNSFQQQSKHlTHLDAQNSFYQSD 89 6999***********************************************************9888866664444444444333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MRTSARKGRS NKIYTARGPR DRRIRLSADI AIQFYDVQDR LGYDRATEAV DWLISKAKGS 60 IDKLFDNSFQ QQSKHLTHLD AQNSFYQSDY YLTESMSGSE DSGVQVDSLT DYGVLNLHNS 120 YDNISTYNCT MDSSMILPCI QMENSSEDQC FAHSTISSPL DLQHSSLPSI QQMENKDQNP 180 RTVMFNSKFS SKYGEHPFIS NSGPLFFQAP NNESPPIHTP ISDPELNLCL PGNYTSTFGD 240 SEKWSIF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 3e-27 | TCP family protein |