PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031086-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 252aa    MW: 28513.1 Da    PI: 8.1534
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031086-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1064.8e-33111511128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...... 79 
                     lp+G++F+Ptd e++ e+L++kv+++       l+  e+i+++d    i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+++      
  AUR62031086-RA  11 LPAGVKFDPTDTEIL-EHLEAKVKSDLgrlhplLD--EFIPTIDgengICYSHPEKLP-GVSKDGVMRHFFHCPSKAYTTGTRKRRKVHtdedgg 101
                     799***********9.99*****998877754322..23555544445**********.555556678******************744456655 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk++++l  +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y++
  AUR62031086-RA 102 ETRWHKTGKTRPILI-NGTVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHI 151
                     778************.999***********66589**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
GAGGINDLPG LPAGVKFDPT DTEILEHLEA KVKSDLGRLH PLLDEFIPTI DGENGICYSH  60
PEKLPGVSKD GVMRHFFHCP SKAYTTGTRK RRKVHTDEDG GETRWHKTGK TRPILINGTV  120
KGFKKILVLY TNYGRQRKPE KTNWVMHQYH IGQNEEERDG EFVLSKVFYQ TQPRQCGSTI  180
KELPQDIEHP ALIKPALNYY HPSYIPYDHH HHQQHNDVGE QNRESPPQLI PNLILQGDGS  240
SLFTIATTRK S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-107NAC family protein