PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62030930-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 25898.4 Da PI: 5.4871 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83.7 | 1.1e-26 | 9 | 57 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 +ri+n + rqvtf+kRr+g++KKA+ELS+LCdaev +iifsstgk+ye AUR62030930-RA 9 ERIDNLTSRQVTFTKRRKGLFKKAKELSILCDAEVGIIIFSSTGKVYEI 57 69*********************************************95 PP | |||||||
2 | K-box | 74.9 | 2.2e-25 | 75 | 169 | 6 | 98 |
K-box 6 gks..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ + +++a+ ++ e++ L++++e+L+++ R+llGedL++Ls+++L+ Le qLe + k iRs+K+e++ ++i+el k e +++en++L+kk+ AUR62030930-RA 75 ENQvlNPTSEAQLWKVEAEGLRQQLEELRKNSRQLLGEDLSELSIEHLETLEAQLEMGTKAIRSRKEEIFQNKIQELNKTEILVHQENMELHKKI 169 44445778999**********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MGRGKITIER IDNLTSRQVT FTKRRKGLFK KAKELSILCD AEVGIIIFSS TGKVYEIASH 60 CMQSLLERYY KANEENQVLN PTSEAQLWKV EAEGLRQQLE ELRKNSRQLL GEDLSELSIE 120 HLETLEAQLE MGTKAIRSRK EEIFQNKIQE LNKTEILVHQ ENMELHKKIN LMRQEMIELQ 180 KKVELNDTNL SIQVTGGQGR DDQEGGTSSG GAASAYDTYD PIELKLS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 4e-71 | MIKC_MADS family protein |