PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62030331-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 139aa MW: 15915.8 Da PI: 7.0699 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.5 | 2.8e-09 | 76 | 105 | 1 | 30 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 ++ +hn+ Er RR++i + ++ Lr llP++ AUR62030331-RA 76 KKLSHNASERVRRKKISNLYSSLRALLPSS 105 6789************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MSSICPTYLG WEYPIELGTN QGFNNVDLDA VFLLNFSSSQ SQDYQFQVYD HVKRSELPQD 60 TSSTDHQFDI NPVLSKKLSH NASERVRRKK ISNLYSSLRA LLPSSDHKMG GNYTAKFENL 120 NEVLMSLLKE QKHMQAYY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 5e-13 | bHLH family protein |