PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62030330-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 405aa MW: 45991.8 Da PI: 5.6863 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.7 | 2.1e-08 | 85 | 113 | 1 | 29 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk 29 ++ +hn+ Er RR++iN+ ++ Lr lP AUR62030330-RA 85 KKLNHNASERDRRKKINNMYSSLRASLPG 113 6789*********************9996 PP | |||||||
2 | HLH | 48 | 2.2e-15 | 218 | 270 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iN+ ++ Lr+llP+ + + kKls +++e++ YI +Lq AUR62030330-RA 218 KKLNHNASERDRRKKINNMYSSLRSLLPTnD---QRKKLSIPATVERVLGYIPQLQ 270 6789*************************66...9999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MLAMSPLCPT NLGWEYPLDL DTNQALFDNL DFDFDTMFLA NISSSQAQDC EVNHQVSSDD 60 HGKRSESPQG TSSTDQLDNN PLLSKKLNHN ASERDRRKKI NNMYSSLRAS LPGIDQRMEG 120 SNVVSFEKMN VELSSLLQMK QMQMEVPISR WEYPLGLDPR QPLDNLDFDS IFLANISSTS 180 QTRDYEDNQM SSDQAKRSES PQGTSSTDQF GKNPSISKKL NHNASERDRR KKINNMYSSL 240 RSLLPTNDQR KKLSIPATVE RVLGYIPQLQ KEVEDLVHKK EDLLSKTSIL QGNARKIVQE 300 ENPNKCIINK TTSCSISSNK LGDKELVIQI SAFERISISE VLLMLEENGY LVLDVSSFQS 360 FGGTTFYNIH LWIQGNCNIN FEKLNEALMF QLQKQQIMHM HVYS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 2e-43 | bHLH family protein |