PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62030329-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 152aa    MW: 17312.7 Da    PI: 4.6082
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62030329-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-1083112130
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPka 30 
                     r+ +hn+ Er RR++iN  ++ Lr+llP+ 
  AUR62030329-RA  83 RKINHNASERDRRKKINVLYSSLRDLLPPT 112
                     6889************************93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MCPFVPTLGL EYPIELETYD QVLLDNNYLN LDSIFLPNIL LSQAQDDSNN NLVKIKQRKS  60
PLSTSLADHQ FGAAVTTTTT MKRKINHNAS ERDRRKKINV LYSSLRDLLP PTDQIVKCGL  120
HDADEQFLYS ADFDIIQFID AMLQYVMETQ E*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18297KRKINHNASERDRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56980.14e-12bHLH family protein