PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62030326-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 272aa    MW: 30751.1 Da    PI: 5.7588
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62030326-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.81.3e-1582134155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++iN+ ++ Lr llP  +   + kKls  +++ ++ eYI +Lq
  AUR62030326-RA  82 KKLNHNASERDRRKKINDMYSSLRALLPAtD---QRKKLSIPATVGRVLEYIPQLQ 134
                     6789*************************77...9999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MLAMSPLLCP TNLGWEYPLE LDTNQDFDNF DFDIDSMFLA TSQAQDCGVS HQVVSSDHVK  60
KSESPQNTSS IDQFDNNPLL SKKLNHNASE RDRRKKINDM YSSLRALLPA TDQRKKLSIP  120
ATVGRVLEYI PQLQKEVDKL ARKKEVFLSK ISALQGNVGK IIQEENPKKC IIDETTSCSI  180
SSNKLGDKEM VIQISTVERI SICEVLLVLE KNGYLVIDVS SFQSFGGRTF YNIHLWTEGG  240
QGKYNVNFEK LNEVLLSLLQ EQKQMQMQMY S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-48bHLH family protein