PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62030160-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 388aa MW: 42191.6 Da PI: 6.7867

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62030160-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.1	5.9e-31	165	223	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ AUR62030160-RA 165 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 223 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MDNFLGDLAD IVRASGDTLL RNIDAISTSS TSFLDNMGVD DEGQGGGRLA SGADGQAQQV 60 MGPSQTPGII NNAAAASPNV VKAAAAAGYG FMSNQLISMN NASCSSSHKG AFVDSSTTTA 120 AVQQLQIPSP RNHGIKRRKI QAKKVVCIPA PAPANSRQTG EVVPSDLWAW RKYGQKPIKG 180 SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSQP 240 ASKTSSKASS PPSQKPSNNK FRNILIKEEN ENVSTTATTF STVKEEEIKL YDDRLDSNKV 300 DEIIESYRPL ILPEPKTNNG RHQQADQDFF ADLVEFESDD PLEIFGTQGC KGFDSFSGLF 360 DWATNNNTPT NEENNDHTTS SLDQEKFK

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MDNFLGDLAD IVRASGDTLL RNIDAISTSS TSFLDNMGVD DEGQGGGRLA SGADGQAQQV  60
MGPSQTPGII NNAAAASPNV VKAAAAAGYG FMSNQLISMN NASCSSSHKG AFVDSSTTTA  120
AVQQLQIPSP RNHGIKRRKI QAKKVVCIPA PAPANSRQTG EVVPSDLWAW RKYGQKPIKG  180
SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSQP  240
ASKTSSKASS PPSQKPSNNK FRNILIKEEN ENVSTTATTF STVKEEEIKL YDDRLDSNKV  300
DEIIESYRPL ILPEPKTNNG RHQQADQDFF ADLVEFESDD PLEIFGTQGC KGFDSFSGLF  360
DWATNNNTPT NEENNDHTTS SLDQEKFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	3e-77	WRKY family protein