PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029778-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 324aa    MW: 36572.7 Da    PI: 5.9218
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029778-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.33.2e-23118178259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg++WrKYGqK + ++ +pr+YYrCt++   +C++ k+v++ +e+p+  +i+Y+g+H+++
  AUR62029778-RA 118 DDGHAWRKYGQKGILNTIYPRNYYRCTHKidqNCQALKQVQQISENPTKYKIIYQGQHTCK 178
                     8***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MENITTFLEK GKESANQIRS FINERLGLKA EDREALDHHS WMTLNSFEAV LSILNASDFD  60
QDDQVLIKKR KFELECPDQS KSEDNIGGGN VVSKERRGCY KRRKTGQSII LEVNNLTDDG  120
HAWRKYGQKG ILNTIYPRNY YRCTHKIDQN CQALKQVQQI SENPTKYKII YQGQHTCKTP  180
HKTPSIIIDD SLEQNSFFLS FETNNHLVAK HALNPTLFPK STFHANTTMV KQEYTPIKVE  240
SPPSLITHDP HSGATTINQN SPTSDITSIG FPSTPVSEQG DVNSSLAPEV HASTAESYDD  300
MDWINEIYAM DQYTSLDGLL DNL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-28WRKY family protein