PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029755-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 369aa MW: 40136.9 Da PI: 4.44

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029755-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.9	1.4e-47	11	137	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrF+Ptdeel ++yLk+kv gk+l + ++i+evd+y++ PwdLp +++k+++ +wyfF++r k+y++g ++nrat+ gyWk+tg+d++ + AUR62029755-RA 11 PPGFRFRPTDEELFMFYLKRKVLGKSLGA-QMISEVDVYRFAPWDLPamACIKTKDLNWYFFCPRVKRYPNGAKANRATEWGYWKSTGNDRTAMY 104 9***********************999.89***********5448888888*********************************9 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ vg ktLvfy+g+apkge+t+Wvmhe+rl AUR62029755-RA 105 -ASRPVGKIKTLVFYRGKAPKGERTNWVMHEFRL 137 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MEGLLGSKSC PPGFRFRPTD EELFMFYLKR KVLGKSLGAQ MISEVDVYRF APWDLPAMAC 60 IKTKDLNWYF FCPRVKRYPN GAKANRATEW GYWKSTGNDR TAMYASRPVG KIKTLVFYRG 120 KAPKGERTNW VMHEFRLDDK MLADKGVPQD SYVICKIFEK SGLGPKNGED YGARFVEEEW 180 DSDTDDTHVP ERASGHVLHD MACGGVADSP DGSVLTSSVG APNAYYPVGT LVADAAATNV 240 ASPSTIAASM GTPYITATSM GTPLDNATSA RIPNDEHVTV DAPNVVATSV GFATAVGSAP 300 DADGMAEDEV DRLLKYFIED AGDVDDIFNG LGDLADTSGL NIDWGDLSDT STQIPDWSNH 360 FIEMDDLI*

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MEGLLGSKSC PPGFRFRPTD EELFMFYLKR KVLGKSLGAQ MISEVDVYRF APWDLPAMAC  60
IKTKDLNWYF FCPRVKRYPN GAKANRATEW GYWKSTGNDR TAMYASRPVG KIKTLVFYRG  120
KAPKGERTNW VMHEFRLDDK MLADKGVPQD SYVICKIFEK SGLGPKNGED YGARFVEEEW  180
DSDTDDTHVP ERASGHVLHD MACGGVADSP DGSVLTSSVG APNAYYPVGT LVADAAATNV  240
ASPSTIAASM GTPYITATSM GTPLDNATSA RIPNDEHVTV DAPNVVATSV GFATAVGSAP  300
DADGMAEDEV DRLLKYFIED AGDVDDIFNG LGDLADTSGL NIDWGDLSDT STQIPDWSNH  360
FIEMDDLI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	1e-77	NAC family protein