PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029543-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 366aa MW: 41602.2 Da PI: 9.74

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029543-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113	3.1e-35	14	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskr...dkkyatgkrknratksgyWkatgkdkev 92 lppGfrF+Ptdeel+ +yL+ k+ + +l++ ++i+ev+ k++Pw+Lp + +e y F+k+ +kk ++++r++rat+sgyW+ tg++ ++ AUR62029543-RA 14 LPPGFRFQPTDEELLFQYLRCKIFSLPLPA-SIIPEVHFPKLDPWELPG---DSMEERYVFTKKggrHKKRNQNNRSSRATNSGYWEDTGSEMHI 104 79**************************.89***********3...356799972224555567899999*********** PP NAM 93 lskkgel......vglkktLvfykgrapkgektdWvmheyrl 128 +++ +g+kktLv++ grap+g+ tdW m+ey+l AUR62029543-RA 105 SPPPSQNfetmiiTGIKKTLVYHMGRAPNGSPTDWYMNEYSL 146 99844444556669************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MKKHNFVGEN LNRLPPGFRF QPTDEELLFQ YLRCKIFSLP LPASIIPEVH FPKLDPWELP 60 GDSMEERYVF TKKGGRHKKR NQNNRSSRAT NSGYWEDTGS EMHISPPPSQ NFETMIITGI 120 KKTLVYHMGR APNGSPTDWY MNEYSLVYNN KYGPWLRASP KKKSRIDTAE REVEKKGMER 180 IKNSSLSRKT PTYNDPDVIK MGPVGAARKL WQKLMLRTIG TSMCEENKLH IYEKLKLEDE 240 EVEKKGESRV SSRENADLNA KNEGFSEEGK GERQMRAKGD KKEGDVAIGE KGRGHRKINI 300 LKRENKGGKE GKMLSGGKRE GCEESCGEFE MEVDGEEVDA MSKRRKVVSS NQNVAGPTPW 360 ALGDQ*

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MKKHNFVGEN LNRLPPGFRF QPTDEELLFQ YLRCKIFSLP LPASIIPEVH FPKLDPWELP  60
GDSMEERYVF TKKGGRHKKR NQNNRSSRAT NSGYWEDTGS EMHISPPPSQ NFETMIITGI  120
KKTLVYHMGR APNGSPTDWY MNEYSLVYNN KYGPWLRASP KKKSRIDTAE REVEKKGMER  180
IKNSSLSRKT PTYNDPDVIK MGPVGAARKL WQKLMLRTIG TSMCEENKLH IYEKLKLEDE  240
EVEKKGESRV SSRENADLNA KNEGFSEEGK GERQMRAKGD KKEGDVAIGE KGRGHRKINI  300
LKRENKGGKE GKMLSGGKRE GCEESCGEFE MEVDGEEVDA MSKRRKVVSS NQNVAGPTPW  360
ALGDQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33480.1	7e-40	NAC family protein