PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029057-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 525aa MW: 58769.4 Da PI: 4.7278

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029057-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.3	3e-53	12	138	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeel+ +yLk+kv++++l+l ++i+e+d+yk+eP+dLp + +k+++++w+fFs+rd+ky++g+r+nratk+gyWkatgkd+++++ AUR62029057-RA 12 PPGFRFHPTDEELILYYLKRKVSRRSLKL-DIIAEIDVYKFEPEDLPglSLLKNGDRQWFFFSPRDRKYPNGSRSNRATKQGYWKATGKDRAITC 105 8**************************.99***********6447888999********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++vg+kktLvfy grap+g++tdWvmhey l AUR62029057-RA 106 -NARNVGIKKTLVFYLGRAPSGKRTDWVMHEYVL 138 .9999*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MAASSSANEV WPPGFRFHPT DEELILYYLK RKVSRRSLKL DIIAEIDVYK FEPEDLPGLS 60 LLKNGDRQWF FFSPRDRKYP NGSRSNRATK QGYWKATGKD RAITCNARNV GIKKTLVFYL 120 GRAPSGKRTD WVMHEYVLEE DELKRCKNVF NYYVIYKVFK KSGAGPKNGE QYGAPFKEED 180 WPEDDYPKST SSCNQLYTAQ QMVSIPPIDI CQNAQVDHSV NDIDEFLNGV LNEPAPLPLN 240 DDDDFDQALS QFIGEEDHSL VTNQSFEEVS TFFRDDDFIE MDDLFSPGPA QGLSTSLSQP 300 TNAEISGNSH FRMEDGEFTL QNSQPTNGEI QGDSHFRMED GLSEFDLYYD ADAILHQVAA 360 SDPTMPFQYH RSQSQGSELV SETWTYEPNL CVVNSTVPST GVVYDGMSES NQKQNQEAES 420 SQSWSSLWSF VDSIPAAPAS AADSALLNKA FQRMSSFSRL KMSSKIIIPA VSGSINSKSS 480 STSAGSRLKG YFFFSFLAAL FAIVCVFIGS NASAFGKLHC RMKL*

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MAASSSANEV WPPGFRFHPT DEELILYYLK RKVSRRSLKL DIIAEIDVYK FEPEDLPGLS  60
LLKNGDRQWF FFSPRDRKYP NGSRSNRATK QGYWKATGKD RAITCNARNV GIKKTLVFYL  120
GRAPSGKRTD WVMHEYVLEE DELKRCKNVF NYYVIYKVFK KSGAGPKNGE QYGAPFKEED  180
WPEDDYPKST SSCNQLYTAQ QMVSIPPIDI CQNAQVDHSV NDIDEFLNGV LNEPAPLPLN  240
DDDDFDQALS QFIGEEDHSL VTNQSFEEVS TFFRDDDFIE MDDLFSPGPA QGLSTSLSQP  300
TNAEISGNSH FRMEDGEFTL QNSQPTNGEI QGDSHFRMED GLSEFDLYYD ADAILHQVAA  360
SDPTMPFQYH RSQSQGSELV SETWTYEPNL CVVNSTVPST GVVYDGMSES NQKQNQEAES  420
SQSWSSLWSF VDSIPAAPAS AADSALLNKA FQRMSSFSRL KMSSKIIIPA VSGSINSKSS  480
STSAGSRLKG YFFFSFLAAL FAIVCVFIGS NASAFGKLHC RMKL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	2e-98	NAC family protein