PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62028897-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | TCP | ||||||||
Protein Properties | Length: 208aa MW: 22428.8 Da PI: 5.9918 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 80.7 | 4e-25 | 1 | 65 | 24 | 88 |
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 ++a+caar+F+L++eLG+++d++t++WLlq +++ai+++tgt++++as++ +++ss+s++ s + AUR62028897-RA 1 MPALCAARIFQLTKELGHKSDGETVQWLLQHSEQAIIAATGTGTIPASFTsTSGSSVSEQR-TSVS 65 9**********************************************99954444444444.3332 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MPALCAARIF QLTKELGHKS DGETVQWLLQ HSEQAIIAAT GTGTIPASFT STSGSSVSEQ 60 RTSVSSGIVS GFSGGLSLIN ENLGRTHFQT GSWGYGSGTV HVPDPGFSSS SSSLMRENLE 120 CRPKMGVHRT MGMSNLNMGF MNFGQQQQQG RDSLELGLSQ DNVNFGVLNY GAFNQMYQQF 180 RQSREEAGFS CDQQEKFLDD GSSQCSR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58100.1 | 6e-23 | TCP family protein |