PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028872-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 258aa    MW: 28708 Da    PI: 5.4776
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028872-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM86.54.9e-271490181
             NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81
                    lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp     + +e yfFs+r+ ky++g+r+nrat sg
  AUR62028872-RA 14 LPPGFRFHPTDEELVVQYLKRKVFACPLPA-SIIPEVDVCKSDPWDLP---GDKGQERYFFSTREAKYPNGNRSNRATMSG 90
                    79****************************.89***************...3467899******************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MERMNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVFACP LPASIIPEVD VCKSDPWDLP  60
GDKGQERYFF STREAKYPNG NRSNRATMSG GKPPNGSRTD WIMHEYRLVD LNQSQTNPQA  120
LNSPLKKGLV QKTGEATGDW VLCRIFLKKR NNAATKNDQE EGGVICEEEE AIVTNKRIGN  180
PVFYDFLARD SRGVAAAADL NLPAPCSSSS GSSAVTDEDG QDNTKHLRMT DINEDSSEER  240
DDSSSSCNSI SYLRREL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-64NAC family protein