PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028800-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 247aa MW: 26334 Da PI: 9.0715

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028800-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.9	2.1e-39	26	114	1	88
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 +a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+ +d++tieWLlqqa+p+++++tgt++++a+++ + s + s+s+ ssg AUR62028800-RA 26 PAPKRTSSKDRHTKVDGRGRRIRMPAQCAARVFQLTRELGHRSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLSLSVRRSGSTVSSG 114 589*******************************************************************9886444444444433332 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MYTENPEHTS STTVLQSGSP SGPKKPAPKR TSSKDRHTKV DGRGRRIRMP AQCAARVFQL 60 TRELGHRSDG ETIEWLLQQA EPSVIAATGT GTIPANFTSL SLSVRRSGST VSSGSHTRPV 120 GYNNSNYFGN NFYVSPSNWM GFSNMLMINA GDQLSNSSRQ INLFPNNGLE LSSTNSSTML 180 NLQHPSADGD TCHAGHPVVV GGYEGQYGML GGFNNGLRGV IPGTIIGSYP NQERSSNNVD 240 HGDASS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	2e-40	TCP family protein