PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028772-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 154aa    MW: 16265.1 Da    PI: 9.2972
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028772-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer431.1e-133313158
     ZF-HD_dimer 31 segee.gtaaalkCaACgCHRnFHRreve 58
                     ++++  ++++l+CaACgCHRnFHRr+++
  AUR62028772-RA  3 GPTANpVDPTSLTCAACGCHRNFHRRDPD 31
                    556666899*****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MPGPTANPVD PTSLTCAACG CHRNFHRRDP DDPTPLHHLI PPSAAARRPH SPPSASQLLL  60
SLSGHTHSPS DHEMVHNSTA SAAAPGIGVV TGFYSNNGGS GGGGQNGNFQ SKKRFRTKFS  120
QEQKEKIVLD AGSNLVYKTV FRGEFAYNAL HIV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.12e-12ZF-HD family protein