PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028570-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 375aa MW: 42168.6 Da PI: 8.6801

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028570-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.3	3.4e-08	48	110	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a eeL++k+ eL +eN++Lk + + ke ++l++ + AUR62028570-RA 48 EKEARRIRRILANRESARQTIRRRQAFHEELTRKATELASENERLKRNKDLAVKEFQSLQTTN 110 799*******************************************99999899999887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MDQPNVFQEE CQSVDVKPEK SYESAERVRV CNSAHNTGRS RHNLTEAEKE ARRIRRILAN 60 RESARQTIRR RQAFHEELTR KATELASENE RLKRNKDLAV KEFQSLQTTN QKLKGQLSQT 120 LGFKLGENEG EAQPCCPDTH NVNTQSANWA QFVYKKLSAS PFVIPACLPP SDLNVSNLTP 180 CRFSEQDNSR SMNGQNMPWC ILPCPMFLPI HDIKNFSSLH MKDRDEGTSV DSNHVHSPSS 240 DYSPSSVIRC VHNCQLVSPA DRISSGLPST QDDCRNGFHR FPFGLSLDGG GQKMVPCCSR 300 GDFAIEREDC VTPHTLVNTN VSSAACVESA SALTEKRKEC VLKKRERNVA RAEARKKRKE 360 LMKLKSRLHC QLIG*

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MDQPNVFQEE CQSVDVKPEK SYESAERVRV CNSAHNTGRS RHNLTEAEKE ARRIRRILAN  60
RESARQTIRR RQAFHEELTR KATELASENE RLKRNKDLAV KEFQSLQTTN QKLKGQLSQT  120
LGFKLGENEG EAQPCCPDTH NVNTQSANWA QFVYKKLSAS PFVIPACLPP SDLNVSNLTP  180
CRFSEQDNSR SMNGQNMPWC ILPCPMFLPI HDIKNFSSLH MKDRDEGTSV DSNHVHSPSS  240
DYSPSSVIRC VHNCQLVSPA DRISSGLPST QDDCRNGFHR FPFGLSLDGG GQKMVPCCSR  300
GDFAIEREDC VTPHTLVNTN VSSAACVESA SALTEKRKEC VLKKRERNVA RAEARKKRKE  360
LMKLKSRLHC QLIG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	336	358	KRKECVLKKRERNVARAEARKKR
2	343	365	KRKECVLKKRERNVARAEARKKR
3	355	360	RKKRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	2e-33	bZIP family protein